Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.06□□□□□ -0.64
Trim63Q38HM4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.06□□□□□ -0.64
Trim63Q38HM4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Syt7-205ENSMUST00000224135 1557 ntBASIC11.06□□□□□ -0.64
Trim63Q38HM4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.06□□□□□ -0.64
Trim63Q38HM4 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.06□□□□□ -0.64
Trim63Q38HM4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim63Q38HM4 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm43221-201ENSMUST00000197612 2071 ntBASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.05□□□□□ -0.64
Trim63Q38HM4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.05□□□□□ -0.64
Trim63Q38HM4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.05□□□□□ -0.64
Trim63Q38HM4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim63Q38HM4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.04□□□□□ -0.64
Trim63Q38HM4 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.04□□□□□ -0.64
Trim63Q38HM4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms