Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sox4Q06831 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox4Q06831 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.25□□□□□ -0.29
Sox4Q06831 Gm44397-201ENSMUST00000195950 113 ntBASIC13.25□□□□□ -0.29
Sox4Q06831 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox4Q06831 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.25□□□□□ -0.29
Sox4Q06831 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox4Q06831 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox4Q06831 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Sox4Q06831 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.25□□□□□ -0.29
Sox4Q06831 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sox4Q06831 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox4Q06831 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Sox4Q06831 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.24□□□□□ -0.29
Sox4Q06831 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Sox4Q06831 Gm15806-201ENSMUST00000120696 955 ntBASIC13.24□□□□□ -0.29
Sox4Q06831 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.24□□□□□ -0.29
Sox4Q06831 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.24□□□□□ -0.29
Sox4Q06831 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.24□□□□□ -0.29
Sox4Q06831 Gm26315-201ENSMUST00000083890 321 ntBASIC13.24□□□□□ -0.29
Sox4Q06831 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox4Q06831 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Sox4Q06831 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sox4Q06831 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox4Q06831 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox4Q06831 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox4Q06831 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.24□□□□□ -0.29
Sox4Q06831 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.23□□□□□ -0.29
Sox4Q06831 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.23□□□□□ -0.29
Sox4Q06831 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox4Q06831 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox4Q06831 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Sox4Q06831 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Gm9002-201ENSMUST00000178437 499 ntBASIC13.23□□□□□ -0.29
Sox4Q06831 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Gm5356-201ENSMUST00000093326 615 ntBASIC13.23□□□□□ -0.29
Sox4Q06831 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms