Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm38355-201ENSMUST00000192514 1570 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm12218-201ENSMUST00000117666 399 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC8.92□□□□□ -0.98
PrkdcP97313 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm9139-201ENSMUST00000218817 700 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 AC166341.2-201ENSMUST00000220571 120 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PrkdcP97313 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
PrkdcP97313 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Gm18038-201ENSMUST00000197900 485 ntBASIC8.91□□□□□ -0.98
PrkdcP97313 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC8.91□□□□□ -0.98
PrkdcP97313 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PrkdcP97313 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC8.91□□□□□ -0.98
PrkdcP97313 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC8.91□□□□□ -0.98
PrkdcP97313 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC8.91□□□□□ -0.98
PrkdcP97313 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC8.91□□□□□ -0.98
PrkdcP97313 Gm45925-201ENSMUST00000218882 744 ntBASIC8.91□□□□□ -0.98
PrkdcP97313 Gm7959-201ENSMUST00000221823 1078 ntBASIC8.91□□□□□ -0.98
PrkdcP97313 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
PrkdcP97313 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Gm22144-201ENSMUST00000157402 102 ntBASIC8.91□□□□□ -0.98
PrkdcP97313 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC8.91□□□□□ -0.98
PrkdcP97313 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC8.91□□□□□ -0.98
PrkdcP97313 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC8.91□□□□□ -0.98
PrkdcP97313 CT030135.2-201ENSMUST00000225255 893 ntBASIC8.91□□□□□ -0.98
PrkdcP97313 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PrkdcP97313 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PrkdcP97313 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PrkdcP97313 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC8.91□□□□□ -0.98
PrkdcP97313 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
PrkdcP97313 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
PrkdcP97313 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC8.9□□□□□ -0.98
PrkdcP97313 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC8.9□□□□□ -0.98
PrkdcP97313 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC8.9□□□□□ -0.98
PrkdcP97313 Mir6998-201ENSMUST00000183343 64 ntBASIC8.9□□□□□ -0.98
PrkdcP97313 Ap3s1-202ENSMUST00000224622 978 ntBASIC8.9□□□□□ -0.98
PrkdcP97313 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
PrkdcP97313 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC8.9□□□□□ -0.98
PrkdcP97313 Gm14314-201ENSMUST00000118225 1015 ntBASIC8.9□□□□□ -0.98
PrkdcP97313 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC8.9□□□□□ -0.98
PrkdcP97313 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC8.9□□□□□ -0.98
PrkdcP97313 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC8.9□□□□□ -0.98
PrkdcP97313 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PrkdcP97313 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Gm37297-201ENSMUST00000192974 2384 ntBASIC8.9□□□□□ -0.98
PrkdcP97313 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
PrkdcP97313 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms