Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cux2P70298 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cux2P70298 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux2P70298 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cux2P70298 Gm15889-202ENSMUST00000212669 2443 ntBASIC21.6■■□□□ 1.05
Cux2P70298 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 AC122197.2-201ENSMUST00000219196 1635 ntBASIC21.6■■□□□ 1.05
Cux2P70298 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Cux2P70298 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC21.6■■□□□ 1.05
Cux2P70298 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC21.6■■□□□ 1.05
Cux2P70298 Gm23363-201ENSMUST00000175024 79 ntBASIC21.6■■□□□ 1.05
Cux2P70298 AC159103.1-201ENSMUST00000228325 429 ntBASIC21.6■■□□□ 1.05
Cux2P70298 AC167013.1-201ENSMUST00000228592 202 ntBASIC21.6■■□□□ 1.05
Cux2P70298 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC21.6■■□□□ 1.05
Cux2P70298 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cux2P70298 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cux2P70298 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC21.59■■□□□ 1.05
Cux2P70298 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC21.59■■□□□ 1.05
Cux2P70298 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Gm8018-201ENSMUST00000173536 789 ntBASIC21.59■■□□□ 1.05
Cux2P70298 Gm5732-201ENSMUST00000182596 1007 ntBASIC21.59■■□□□ 1.05
Cux2P70298 Gm43916-201ENSMUST00000205062 967 ntBASIC21.59■■□□□ 1.05
Cux2P70298 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC21.59■■□□□ 1.05
Cux2P70298 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cux2P70298 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cux2P70298 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cux2P70298 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cux2P70298 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Cux2P70298 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Cux2P70298 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC21.58■■□□□ 1.05
Cux2P70298 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC21.58■■□□□ 1.05
Cux2P70298 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC21.58■■□□□ 1.05
Cux2P70298 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Gm6039-201ENSMUST00000121667 1250 ntBASIC21.58■■□□□ 1.05
Cux2P70298 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC21.58■■□□□ 1.05
Cux2P70298 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC21.58■■□□□ 1.05
Cux2P70298 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC21.58■■□□□ 1.05
Cux2P70298 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cux2P70298 Gm6580-201ENSMUST00000117504 1357 ntBASIC21.58■■□□□ 1.05
Cux2P70298 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cux2P70298 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cux2P70298 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC21.58■■□□□ 1.04
Cux2P70298 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cux2P70298 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Cux2P70298 Gm12165-201ENSMUST00000117047 342 ntBASIC21.57■■□□□ 1.04
Cux2P70298 Gm13888-201ENSMUST00000119148 422 ntBASIC21.57■■□□□ 1.04
Cux2P70298 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC21.57■■□□□ 1.04
Cux2P70298 AC132901.1-201ENSMUST00000224345 508 ntBASIC21.57■■□□□ 1.04
Cux2P70298 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cux2P70298 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cux2P70298 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cux2P70298 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cux2P70298 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cux2P70298 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cux2P70298 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC21.56■■□□□ 1.04
Cux2P70298 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC21.56■■□□□ 1.04
Cux2P70298 Gm5616-201ENSMUST00000165252 384 ntBASIC21.56■■□□□ 1.04
Cux2P70298 Gm8741-201ENSMUST00000174736 384 ntBASIC21.56■■□□□ 1.04
Cux2P70298 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms