Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.86□□□□□ -0.03
Hmgb1P63158 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Hmgb1P63158 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.86□□□□□ -0.03
Hmgb1P63158 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.86□□□□□ -0.03
Hmgb1P63158 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Hmgb1P63158 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.86□□□□□ -0.03
Hmgb1P63158 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Hmgb1P63158 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgb1P63158 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.85□□□□□ -0.03
Hmgb1P63158 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Gm9063-201ENSMUST00000223299 582 ntBASIC14.85□□□□□ -0.03
Hmgb1P63158 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.85□□□□□ -0.03
Hmgb1P63158 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.85□□□□□ -0.03
Hmgb1P63158 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmgb1P63158 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgb1P63158 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 Mir874-201ENSMUST00000104769 76 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms