Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.35□□□□□ -0.27
Crnkl1P63154 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.35□□□□□ -0.27
Crnkl1P63154 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Crnkl1P63154 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Crnkl1P63154 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.34□□□□□ -0.27
Crnkl1P63154 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.34□□□□□ -0.27
Crnkl1P63154 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Crnkl1P63154 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.34□□□□□ -0.27
Crnkl1P63154 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.34□□□□□ -0.27
Crnkl1P63154 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Crnkl1P63154 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Crnkl1P63154 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.34□□□□□ -0.27
Crnkl1P63154 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Crnkl1P63154 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Crnkl1P63154 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Gm11543-201ENSMUST00000120758 370 ntBASIC13.33□□□□□ -0.28
Crnkl1P63154 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.33□□□□□ -0.28
Crnkl1P63154 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Crnkl1P63154 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Crnkl1P63154 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms