Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm13350-201ENSMUST00000120519 479 ntBASIC13.79□□□□□ -0.2
Ybx1P62960 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ybx1P62960 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ybx1P62960 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ybx1P62960 Gm25261-201ENSMUST00000157416 134 ntBASIC13.79□□□□□ -0.2
Ybx1P62960 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Gm27243-201ENSMUST00000183964 521 ntBASIC13.79□□□□□ -0.2
Ybx1P62960 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.79□□□□□ -0.2
Ybx1P62960 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Gm37922-201ENSMUST00000195596 455 ntBASIC13.79□□□□□ -0.2
Ybx1P62960 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.79□□□□□ -0.2
Ybx1P62960 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.79□□□□□ -0.2
Ybx1P62960 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ybx1P62960 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ybx1P62960 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ybx1P62960 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ybx1P62960 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ybx1P62960 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.79□□□□□ -0.2
Ybx1P62960 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ybx1P62960 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.79□□□□□ -0.2
Ybx1P62960 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Ybx1P62960 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ybx1P62960 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Ybx1P62960 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Ybx1P62960 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Gm14350-201ENSMUST00000116642 640 ntBASIC13.78□□□□□ -0.2
Ybx1P62960 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.78□□□□□ -0.2
Ybx1P62960 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.78□□□□□ -0.2
Ybx1P62960 Gm43133-201ENSMUST00000197472 463 ntBASIC13.78□□□□□ -0.2
Ybx1P62960 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.78□□□□□ -0.2
Ybx1P62960 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Ybx1P62960 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.78□□□□□ -0.2
Ybx1P62960 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.78□□□□□ -0.2
Ybx1P62960 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.78□□□□□ -0.2
Ybx1P62960 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.78□□□□□ -0.2
Ybx1P62960 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.78□□□□□ -0.2
Ybx1P62960 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.78□□□□□ -0.2
Ybx1P62960 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ybx1P62960 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ybx1P62960 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ybx1P62960 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ybx1P62960 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ybx1P62960 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ybx1P62960 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ybx1P62960 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Ybx1P62960 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.77□□□□□ -0.21
Ybx1P62960 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.77□□□□□ -0.21
Ybx1P62960 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.77□□□□□ -0.21
Ybx1P62960 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.77□□□□□ -0.21
Ybx1P62960 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.77□□□□□ -0.21
Ybx1P62960 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.77□□□□□ -0.21
Ybx1P62960 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.77□□□□□ -0.21
Ybx1P62960 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Gm26927-201ENSMUST00000182385 965 ntBASIC13.77□□□□□ -0.21
Ybx1P62960 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ybx1P62960 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.77□□□□□ -0.21
Ybx1P62960 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ybx1P62960 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ybx1P62960 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms