Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.64□□□□□ -0.87
Cks1bP61025 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.64□□□□□ -0.87
Cks1bP61025 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC9.64□□□□□ -0.87
Cks1bP61025 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.64□□□□□ -0.87
Cks1bP61025 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.64□□□□□ -0.87
Cks1bP61025 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.64□□□□□ -0.87
Cks1bP61025 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cks1bP61025 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cks1bP61025 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1bP61025 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Cks1bP61025 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC9.63□□□□□ -0.87
Cks1bP61025 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC9.63□□□□□ -0.87
Cks1bP61025 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.63□□□□□ -0.87
Cks1bP61025 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC9.63□□□□□ -0.87
Cks1bP61025 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Cks1bP61025 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC9.63□□□□□ -0.87
Cks1bP61025 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.63□□□□□ -0.87
Cks1bP61025 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms