Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nphp4P59240 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nphp4P59240 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nphp4P59240 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nphp4P59240 Gm15370-201ENSMUST00000117158 253 ntBASIC18.06■□□□□ 0.48
Nphp4P59240 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nphp4P59240 Gm8738-201ENSMUST00000172606 329 ntBASIC18.06■□□□□ 0.48
Nphp4P59240 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nphp4P59240 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC18.06■□□□□ 0.48
Nphp4P59240 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nphp4P59240 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Nphp4P59240 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nphp4P59240 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nphp4P59240 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nphp4P59240 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.05■□□□□ 0.48
Nphp4P59240 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC18.05■□□□□ 0.48
Nphp4P59240 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC18.05■□□□□ 0.48
Nphp4P59240 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC18.05■□□□□ 0.48
Nphp4P59240 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Gm38241-201ENSMUST00000192641 898 ntBASIC18.05■□□□□ 0.48
Nphp4P59240 Gm8099-201ENSMUST00000200510 742 ntBASIC18.05■□□□□ 0.48
Nphp4P59240 CT009713.10-202ENSMUST00000225734 696 ntBASIC18.05■□□□□ 0.48
Nphp4P59240 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Gm24526-201ENSMUST00000082921 158 ntBASIC18.05■□□□□ 0.48
Nphp4P59240 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.05■□□□□ 0.48
Nphp4P59240 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC18.05■□□□□ 0.48
Nphp4P59240 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nphp4P59240 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.05■□□□□ 0.48
Nphp4P59240 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nphp4P59240 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC18.04■□□□□ 0.48
Nphp4P59240 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nphp4P59240 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.04■□□□□ 0.48
Nphp4P59240 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC18.04■□□□□ 0.48
Nphp4P59240 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Gm5989-201ENSMUST00000096092 2077 ntBASIC18.04■□□□□ 0.48
Nphp4P59240 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Gm11964-201ENSMUST00000120982 444 ntBASIC18.04■□□□□ 0.48
Nphp4P59240 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC18.04■□□□□ 0.48
Nphp4P59240 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nphp4P59240 Gm19931-201ENSMUST00000198920 368 ntBASIC18.04■□□□□ 0.48
Nphp4P59240 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC18.04■□□□□ 0.48
Nphp4P59240 Morn2-202ENSMUST00000227729 656 ntBASIC18.04■□□□□ 0.48
Nphp4P59240 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.04■□□□□ 0.48
Nphp4P59240 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nphp4P59240 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.03■□□□□ 0.48
Nphp4P59240 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Nphp4P59240 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 Gm2420-202ENSMUST00000202224 2249 ntBASIC18.03■□□□□ 0.48
Nphp4P59240 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nphp4P59240 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.03■□□□□ 0.48
Nphp4P59240 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nphp4P59240 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.03■□□□□ 0.48
Nphp4P59240 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC18.03■□□□□ 0.48
Nphp4P59240 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC18.03■□□□□ 0.48
Nphp4P59240 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC18.03■□□□□ 0.48
Nphp4P59240 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC18.03■□□□□ 0.48
Nphp4P59240 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC18.03■□□□□ 0.48
Nphp4P59240 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nphp4P59240 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nphp4P59240 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms