Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SmoP56726 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.53□□□□□ -0.24
SmoP56726 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.53□□□□□ -0.24
SmoP56726 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.53□□□□□ -0.24
SmoP56726 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Gm10156-201ENSMUST00000122364 462 ntBASIC13.53□□□□□ -0.24
SmoP56726 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.53□□□□□ -0.24
SmoP56726 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SmoP56726 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Gm8810-201ENSMUST00000172895 754 ntBASIC13.53□□□□□ -0.24
SmoP56726 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.53□□□□□ -0.24
SmoP56726 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SmoP56726 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.53□□□□□ -0.24
SmoP56726 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SmoP56726 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SmoP56726 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SmoP56726 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SmoP56726 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.52□□□□□ -0.24
SmoP56726 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SmoP56726 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SmoP56726 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SmoP56726 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.52□□□□□ -0.25
SmoP56726 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Gm8213-201ENSMUST00000118191 441 ntBASIC13.52□□□□□ -0.25
SmoP56726 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.52□□□□□ -0.25
SmoP56726 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.52□□□□□ -0.25
SmoP56726 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SmoP56726 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.52□□□□□ -0.25
SmoP56726 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SmoP56726 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.52□□□□□ -0.25
SmoP56726 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.52□□□□□ -0.25
SmoP56726 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SmoP56726 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.52□□□□□ -0.25
SmoP56726 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SmoP56726 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SmoP56726 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
SmoP56726 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.51□□□□□ -0.25
SmoP56726 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.51□□□□□ -0.25
SmoP56726 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SmoP56726 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 Gm6447-201ENSMUST00000118905 835 ntBASIC13.51□□□□□ -0.25
SmoP56726 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.51□□□□□ -0.25
SmoP56726 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SmoP56726 Gm29649-201ENSMUST00000185649 419 ntBASIC13.51□□□□□ -0.25
SmoP56726 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.51□□□□□ -0.25
SmoP56726 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.51□□□□□ -0.25
SmoP56726 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.51□□□□□ -0.25
SmoP56726 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SmoP56726 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.51□□□□□ -0.25
SmoP56726 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms