Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NcanP55066 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.09□□□□□ -0.15
NcanP55066 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.09□□□□□ -0.15
NcanP55066 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NcanP55066 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
NcanP55066 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NcanP55066 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NcanP55066 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.08□□□□□ -0.15
NcanP55066 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
NcanP55066 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NcanP55066 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.08□□□□□ -0.16
NcanP55066 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NcanP55066 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.08□□□□□ -0.16
NcanP55066 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
NcanP55066 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Gm20392-201ENSMUST00000173047 701 ntBASIC14.08□□□□□ -0.16
NcanP55066 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Gm8712-201ENSMUST00000221090 701 ntBASIC14.08□□□□□ -0.16
NcanP55066 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.08□□□□□ -0.16
NcanP55066 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.08□□□□□ -0.16
NcanP55066 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
NcanP55066 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.08□□□□□ -0.16
NcanP55066 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NcanP55066 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
NcanP55066 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NcanP55066 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.07□□□□□ -0.16
NcanP55066 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NcanP55066 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
NcanP55066 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.07□□□□□ -0.16
NcanP55066 Gm13408-201ENSMUST00000119822 798 ntBASIC14.07□□□□□ -0.16
NcanP55066 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.07□□□□□ -0.16
NcanP55066 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.07□□□□□ -0.16
NcanP55066 Gm13935-201ENSMUST00000121859 798 ntBASIC14.07□□□□□ -0.16
NcanP55066 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.07□□□□□ -0.16
NcanP55066 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.07□□□□□ -0.16
NcanP55066 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NcanP55066 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.07□□□□□ -0.16
NcanP55066 Spcs1-203ENSMUST00000226374 592 ntBASIC14.07□□□□□ -0.16
NcanP55066 Gm25517-201ENSMUST00000083865 134 ntBASIC14.07□□□□□ -0.16
NcanP55066 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
NcanP55066 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.07□□□□□ -0.16
NcanP55066 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
NcanP55066 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NcanP55066 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NcanP55066 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms