Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.53□□□□□ -0.08
Nub1P54729 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Gm12485-201ENSMUST00000119641 291 ntBASIC14.53□□□□□ -0.08
Nub1P54729 Gm12341-201ENSMUST00000119724 503 ntBASIC14.53□□□□□ -0.08
Nub1P54729 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Gm37917-201ENSMUST00000194711 392 ntBASIC14.53□□□□□ -0.08
Nub1P54729 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.53□□□□□ -0.08
Nub1P54729 Gm19220-201ENSMUST00000222682 803 ntBASIC14.53□□□□□ -0.08
Nub1P54729 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nub1P54729 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Acot6-202ENSMUST00000222921 3622 ntBASIC14.53□□□□□ -0.08
Nub1P54729 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.53□□□□□ -0.08
Nub1P54729 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Nub1P54729 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nub1P54729 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nub1P54729 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.52□□□□□ -0.08
Nub1P54729 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nub1P54729 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nub1P54729 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nub1P54729 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nub1P54729 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nub1P54729 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.52□□□□□ -0.09
Nub1P54729 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nub1P54729 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.52□□□□□ -0.09
Nub1P54729 Gm18624-201ENSMUST00000220966 658 ntBASIC14.52□□□□□ -0.09
Nub1P54729 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.52□□□□□ -0.09
Nub1P54729 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.52□□□□□ -0.09
Nub1P54729 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Matn2-206ENSMUST00000228570 2798 ntBASIC14.52□□□□□ -0.09
Nub1P54729 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.52□□□□□ -0.09
Nub1P54729 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nub1P54729 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.51□□□□□ -0.09
Nub1P54729 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Nub1P54729 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.51□□□□□ -0.09
Nub1P54729 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nub1P54729 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.51□□□□□ -0.09
Nub1P54729 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nub1P54729 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.51□□□□□ -0.09
Nub1P54729 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.51□□□□□ -0.09
Nub1P54729 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.51□□□□□ -0.09
Nub1P54729 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
Nub1P54729 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.51□□□□□ -0.09
Nub1P54729 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.51□□□□□ -0.09
Nub1P54729 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.51□□□□□ -0.09
Nub1P54729 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nub1P54729 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.51□□□□□ -0.09
Nub1P54729 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nub1P54729 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms