Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sox1P53783 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sox1P53783 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.71□□□□□ -0.21
Sox1P53783 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.71□□□□□ -0.21
Sox1P53783 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Sox1P53783 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sox1P53783 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Sox1P53783 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.71□□□□□ -0.21
Sox1P53783 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Gm17330-201ENSMUST00000221047 165 ntBASIC13.71□□□□□ -0.21
Sox1P53783 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.71□□□□□ -0.21
Sox1P53783 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.71□□□□□ -0.21
Sox1P53783 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.71□□□□□ -0.21
Sox1P53783 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox1P53783 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox1P53783 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.71□□□□□ -0.22
Sox1P53783 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.71□□□□□ -0.22
Sox1P53783 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Sox1P53783 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.71□□□□□ -0.22
Sox1P53783 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.71□□□□□ -0.22
Sox1P53783 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox1P53783 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox1P53783 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox1P53783 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox1P53783 Gm13888-201ENSMUST00000119148 422 ntBASIC13.7□□□□□ -0.22
Sox1P53783 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox1P53783 Gm19891-201ENSMUST00000189771 303 ntBASIC13.7□□□□□ -0.22
Sox1P53783 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.7□□□□□ -0.22
Sox1P53783 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox1P53783 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox1P53783 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox1P53783 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox1P53783 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.7□□□□□ -0.22
Sox1P53783 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Sox1P53783 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox1P53783 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox1P53783 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Sox1P53783 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox1P53783 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox1P53783 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.69□□□□□ -0.22
Sox1P53783 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Sox1P53783 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.69□□□□□ -0.22
Sox1P53783 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.69□□□□□ -0.22
Sox1P53783 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox1P53783 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.69□□□□□ -0.22
Sox1P53783 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.69□□□□□ -0.22
Sox1P53783 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.69□□□□□ -0.22
Sox1P53783 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.69□□□□□ -0.22
Sox1P53783 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.69□□□□□ -0.22
Sox1P53783 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox1P53783 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms