Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm27920-201ENSMUST00000183953 96 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm37230-201ENSMUST00000194491 818 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hmx3P42581 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmx3P42581 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hmx3P42581 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hmx3P42581 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Hmx3P42581 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.29□□□□□ -0.6
Hmx3P42581 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hmx3P42581 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hmx3P42581 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Gm27525-201ENSMUST00000184465 107 ntBASIC11.29□□□□□ -0.6
Hmx3P42581 Gm20553-201ENSMUST00000204205 844 ntBASIC11.29□□□□□ -0.6
Hmx3P42581 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.29□□□□□ -0.6
Hmx3P42581 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hmx3P42581 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hmx3P42581 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Hmx3P42581 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hmx3P42581 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Hmx3P42581 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hmx3P42581 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hmx3P42581 Gm6973-201ENSMUST00000117080 721 ntBASIC11.28□□□□□ -0.6
Hmx3P42581 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.28□□□□□ -0.6
Hmx3P42581 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmx3P42581 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms