Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.79□□□□□ -0.2
Cxcl12P40224 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Gm3508-201ENSMUST00000186012 792 ntBASIC13.79□□□□□ -0.2
Cxcl12P40224 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.79□□□□□ -0.2
Cxcl12P40224 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.79□□□□□ -0.2
Cxcl12P40224 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.79□□□□□ -0.2
Cxcl12P40224 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl12P40224 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.78□□□□□ -0.2
Cxcl12P40224 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.78□□□□□ -0.2
Cxcl12P40224 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Cxcl12P40224 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.78□□□□□ -0.2
Cxcl12P40224 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cxcl12P40224 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm27046-201ENSMUST00000182160 463 ntBASIC13.78□□□□□ -0.2
Cxcl12P40224 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.78□□□□□ -0.2
Cxcl12P40224 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cxcl12P40224 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
Cxcl12P40224 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl12P40224 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cxcl12P40224 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms