Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HmgclP38060 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.29□□□□□ -0.28
HmgclP38060 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HmgclP38060 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HmgclP38060 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.29□□□□□ -0.28
HmgclP38060 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.29□□□□□ -0.28
HmgclP38060 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.29□□□□□ -0.28
HmgclP38060 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.29□□□□□ -0.28
HmgclP38060 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.29□□□□□ -0.28
HmgclP38060 Gm15823-201ENSMUST00000064305 670 ntBASIC13.29□□□□□ -0.28
HmgclP38060 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HmgclP38060 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.29□□□□□ -0.28
HmgclP38060 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.29□□□□□ -0.28
HmgclP38060 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HmgclP38060 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.29□□□□□ -0.28
HmgclP38060 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HmgclP38060 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Gm13689-201ENSMUST00000119360 685 ntBASIC13.28□□□□□ -0.28
HmgclP38060 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.28□□□□□ -0.28
HmgclP38060 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.28□□□□□ -0.28
HmgclP38060 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.28□□□□□ -0.28
HmgclP38060 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Gm45668-201ENSMUST00000211271 493 ntBASIC13.28□□□□□ -0.28
HmgclP38060 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.28□□□□□ -0.28
HmgclP38060 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HmgclP38060 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
HmgclP38060 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HmgclP38060 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HmgclP38060 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HmgclP38060 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HmgclP38060 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HmgclP38060 Gm15371-201ENSMUST00000117057 784 ntBASIC13.27□□□□□ -0.29
HmgclP38060 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HmgclP38060 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.27□□□□□ -0.29
HmgclP38060 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HmgclP38060 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.27□□□□□ -0.29
HmgclP38060 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HmgclP38060 Gm29608-201ENSMUST00000190444 463 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms