Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.16□□□□□ -0.14
Usp4P35123 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp4P35123 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Usp4P35123 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp4P35123 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp4P35123 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.15□□□□□ -0.14
Usp4P35123 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.15□□□□□ -0.14
Usp4P35123 Gm14767-201ENSMUST00000121559 586 ntBASIC14.15□□□□□ -0.14
Usp4P35123 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp4P35123 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp4P35123 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp4P35123 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.15□□□□□ -0.14
Usp4P35123 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp4P35123 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp4P35123 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp4P35123 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp4P35123 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp4P35123 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Usp4P35123 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Usp4P35123 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.14□□□□□ -0.15
Usp4P35123 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp4P35123 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Usp4P35123 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp4P35123 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp4P35123 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp4P35123 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp4P35123 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.14□□□□□ -0.15
Usp4P35123 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp4P35123 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Usp4P35123 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp4P35123 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.13□□□□□ -0.15
Usp4P35123 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.13□□□□□ -0.15
Usp4P35123 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp4P35123 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.13□□□□□ -0.15
Usp4P35123 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp4P35123 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Usp4P35123 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Usp4P35123 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms