Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
BgnP28653 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
BgnP28653 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.47□□□□□ -0.41
BgnP28653 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BgnP28653 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
BgnP28653 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.47□□□□□ -0.41
BgnP28653 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.47□□□□□ -0.41
BgnP28653 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BgnP28653 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.47□□□□□ -0.41
BgnP28653 Mir8098-201ENSMUST00000184011 137 ntBASIC12.47□□□□□ -0.41
BgnP28653 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
BgnP28653 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
BgnP28653 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BgnP28653 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.46□□□□□ -0.41
BgnP28653 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.46□□□□□ -0.41
BgnP28653 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
BgnP28653 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
BgnP28653 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
BgnP28653 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.46□□□□□ -0.41
BgnP28653 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.46□□□□□ -0.41
BgnP28653 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
BgnP28653 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.46□□□□□ -0.41
BgnP28653 Gm37714-201ENSMUST00000194742 342 ntBASIC12.46□□□□□ -0.41
BgnP28653 Gm5864-201ENSMUST00000202263 970 ntBASIC12.46□□□□□ -0.41
BgnP28653 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.46□□□□□ -0.41
BgnP28653 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.46□□□□□ -0.41
BgnP28653 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
BgnP28653 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
BgnP28653 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BgnP28653 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
BgnP28653 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.46□□□□□ -0.42
BgnP28653 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
BgnP28653 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
BgnP28653 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BgnP28653 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.46□□□□□ -0.42
BgnP28653 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
BgnP28653 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
BgnP28653 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.45□□□□□ -0.42
BgnP28653 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BgnP28653 Pck2-205ENSMUST00000226352 2784 ntBASIC12.45□□□□□ -0.42
BgnP28653 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms