Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.26□□□□□ -0.61
Col8a2P25318 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col8a2P25318 Gm7561-201ENSMUST00000211203 886 ntBASIC11.26□□□□□ -0.61
Col8a2P25318 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.26□□□□□ -0.61
Col8a2P25318 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col8a2P25318 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.26□□□□□ -0.61
Col8a2P25318 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Col8a2P25318 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col8a2P25318 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.25□□□□□ -0.61
Col8a2P25318 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.25□□□□□ -0.61
Col8a2P25318 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.25□□□□□ -0.61
Col8a2P25318 Gm38671-201ENSMUST00000200573 130 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Gm17330-201ENSMUST00000221047 165 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Gm26315-201ENSMUST00000083890 321 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.25□□□□□ -0.61
Col8a2P25318 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col8a2P25318 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.25□□□□□ -0.61
Col8a2P25318 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Col8a2P25318 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Col8a2P25318 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col8a2P25318 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.24□□□□□ -0.61
Col8a2P25318 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col8a2P25318 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col8a2P25318 Mir1894-201ENSMUST00000122802 81 ntBASIC11.24□□□□□ -0.61
Col8a2P25318 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.24□□□□□ -0.61
Col8a2P25318 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.24□□□□□ -0.61
Col8a2P25318 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
Col8a2P25318 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Gm8810-201ENSMUST00000172895 754 ntBASIC11.24□□□□□ -0.61
Col8a2P25318 Proscos-202ENSMUST00000178990 666 ntBASIC11.24□□□□□ -0.61
Col8a2P25318 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Col8a2P25318 Gm44397-201ENSMUST00000195950 113 ntBASIC11.24□□□□□ -0.61
Col8a2P25318 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.24□□□□□ -0.61
Col8a2P25318 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col8a2P25318 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col8a2P25318 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
Col8a2P25318 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col8a2P25318 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Col8a2P25318 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.24□□□□□ -0.61
Col8a2P25318 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms