Protein–RNA interactions for Protein: P23979

Htr3a, 5-hydroxytryptamine receptor 3A, mousemouse

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htr3aP23979 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Htr3aP23979 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Htr3aP23979 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Htr3aP23979 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Htr3aP23979 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Htr3aP23979 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Htr3aP23979 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Htr3aP23979 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Htr3aP23979 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.01□□□□□ -0.33
Htr3aP23979 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Htr3aP23979 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13□□□□□ -0.33
Htr3aP23979 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
Htr3aP23979 Gm37015-201ENSMUST00000192763 1521 ntBASIC13□□□□□ -0.33
Htr3aP23979 Ldb3-207ENSMUST00000227819 1499 ntBASIC13□□□□□ -0.33
Htr3aP23979 Gm13859-201ENSMUST00000119936 1423 ntBASIC13□□□□□ -0.33
Htr3aP23979 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13□□□□□ -0.33
Htr3aP23979 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13□□□□□ -0.33
Htr3aP23979 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13□□□□□ -0.33
Htr3aP23979 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13□□□□□ -0.33
Htr3aP23979 Gm15240-201ENSMUST00000118156 720 ntBASIC13□□□□□ -0.33
Htr3aP23979 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13□□□□□ -0.33
Htr3aP23979 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13□□□□□ -0.33
Htr3aP23979 Gm31326-201ENSMUST00000191856 1048 ntBASIC13□□□□□ -0.33
Htr3aP23979 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13□□□□□ -0.33
Htr3aP23979 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13□□□□□ -0.33
Htr3aP23979 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13□□□□□ -0.33
Htr3aP23979 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13□□□□□ -0.33
Htr3aP23979 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Htr3aP23979 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Htr3aP23979 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Htr3aP23979 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Gm15770-201ENSMUST00000117498 584 ntBASIC12.99□□□□□ -0.33
Htr3aP23979 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Htr3aP23979 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.99□□□□□ -0.33
Htr3aP23979 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Htr3aP23979 Gm42612-201ENSMUST00000197986 623 ntBASIC12.99□□□□□ -0.33
Htr3aP23979 Gm43170-201ENSMUST00000199827 612 ntBASIC12.99□□□□□ -0.33
Htr3aP23979 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.99□□□□□ -0.33
Htr3aP23979 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Htr3aP23979 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Htr3aP23979 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Htr3aP23979 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Htr3aP23979 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Htr3aP23979 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Htr3aP23979 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms