Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cbx3P23198 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.27□□□□□ -0.45
Cbx3P23198 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.27□□□□□ -0.45
Cbx3P23198 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.27□□□□□ -0.45
Cbx3P23198 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cbx3P23198 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.27□□□□□ -0.45
Cbx3P23198 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cbx3P23198 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Cbx3P23198 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.27□□□□□ -0.45
Cbx3P23198 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.27□□□□□ -0.45
Cbx3P23198 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.27□□□□□ -0.45
Cbx3P23198 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cbx3P23198 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cbx3P23198 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cbx3P23198 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.26□□□□□ -0.45
Cbx3P23198 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cbx3P23198 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cbx3P23198 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Cbx3P23198 Gm15173-201ENSMUST00000122049 433 ntBASIC12.26□□□□□ -0.45
Cbx3P23198 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.26□□□□□ -0.45
Cbx3P23198 Gm8584-201ENSMUST00000171982 758 ntBASIC12.26□□□□□ -0.45
Cbx3P23198 Gm27459-201ENSMUST00000184860 107 ntBASIC12.26□□□□□ -0.45
Cbx3P23198 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.26□□□□□ -0.45
Cbx3P23198 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.26□□□□□ -0.45
Cbx3P23198 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cbx3P23198 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.26□□□□□ -0.45
Cbx3P23198 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Birc2-201ENSMUST00000054878 378 ntBASIC12.26□□□□□ -0.45
Cbx3P23198 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.26□□□□□ -0.45
Cbx3P23198 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.26□□□□□ -0.45
Cbx3P23198 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.26□□□□□ -0.45
Cbx3P23198 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cbx3P23198 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.25□□□□□ -0.45
Cbx3P23198 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Cbx3P23198 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.25□□□□□ -0.45
Cbx3P23198 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cbx3P23198 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.25□□□□□ -0.45
Cbx3P23198 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms