Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Gm22189-201ENSMUST00000103822 86 ntBASIC12.72□□□□□ -0.37
TP20293 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.72□□□□□ -0.37
TP20293 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.72□□□□□ -0.37
TP20293 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.72□□□□□ -0.37
TP20293 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.72□□□□□ -0.37
TP20293 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.72□□□□□ -0.37
TP20293 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TP20293 Gm44719-201ENSMUST00000206404 149 ntBASIC12.72□□□□□ -0.37
TP20293 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.72□□□□□ -0.37
TP20293 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.72□□□□□ -0.37
TP20293 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TP20293 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TP20293 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.72□□□□□ -0.37
TP20293 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TP20293 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TP20293 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TP20293 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.72□□□□□ -0.37
TP20293 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TP20293 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.72□□□□□ -0.37
TP20293 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TP20293 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.71□□□□□ -0.37
TP20293 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.71□□□□□ -0.37
TP20293 Gm27437-201ENSMUST00000183429 107 ntBASIC12.71□□□□□ -0.37
TP20293 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Gm18905-201ENSMUST00000205454 928 ntBASIC12.71□□□□□ -0.37
TP20293 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TP20293 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.71□□□□□ -0.38
TP20293 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TP20293 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.7□□□□□ -0.38
TP20293 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TP20293 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TP20293 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.7□□□□□ -0.38
TP20293 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.7□□□□□ -0.38
TP20293 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
TP20293 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TP20293 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.7□□□□□ -0.38
TP20293 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.7□□□□□ -0.38
TP20293 Mir6977-201ENSMUST00000184960 64 ntBASIC12.7□□□□□ -0.38
TP20293 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms