Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Msx1P13297 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Gm2445-201ENSMUST00000182798 989 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Gm37424-201ENSMUST00000191727 561 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 AC102542.1-201ENSMUST00000225204 1138 ntBASIC12.87□□□□□ -0.35
Msx1P13297 AC132881.2-201ENSMUST00000225474 709 ntBASIC12.87□□□□□ -0.35
Msx1P13297 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Msx1P13297 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msx1P13297 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.87□□□□□ -0.35
Msx1P13297 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.87□□□□□ -0.35
Msx1P13297 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.87□□□□□ -0.35
Msx1P13297 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msx1P13297 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx1P13297 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Msx1P13297 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Gm15198-201ENSMUST00000117283 177 ntBASIC12.86□□□□□ -0.35
Msx1P13297 Gm649-201ENSMUST00000117284 1054 ntBASIC12.86□□□□□ -0.35
Msx1P13297 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Msx1P13297 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.86□□□□□ -0.35
Msx1P13297 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.86□□□□□ -0.35
Msx1P13297 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.86□□□□□ -0.35
Msx1P13297 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx1P13297 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Msx1P13297 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.85□□□□□ -0.35
Msx1P13297 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.85□□□□□ -0.35
Msx1P13297 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Gm37965-201ENSMUST00000195304 1362 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Gm14660-201ENSMUST00000119809 575 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.85□□□□□ -0.35
Msx1P13297 Gm25026-201ENSMUST00000175017 188 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.85□□□□□ -0.35
Msx1P13297 Gm9257-201ENSMUST00000221254 232 ntBASIC12.85□□□□□ -0.35
Msx1P13297 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.85□□□□□ -0.35
Msx1P13297 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Msx1P13297 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx1P13297 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Msx1P13297 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms