Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.05□□□□□ -0.32
Fv4P11370 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Fv4P11370 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Fv4P11370 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Fv4P11370 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Fv4P11370 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Fv4P11370 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.05□□□□□ -0.32
Fv4P11370 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.05□□□□□ -0.32
Fv4P11370 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fv4P11370 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Fv4P11370 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Fv4P11370 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Mir874-201ENSMUST00000104769 76 ntBASIC13.04□□□□□ -0.32
Fv4P11370 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.04□□□□□ -0.32
Fv4P11370 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.04□□□□□ -0.32
Fv4P11370 Gm17795-201ENSMUST00000214505 757 ntBASIC13.04□□□□□ -0.32
Fv4P11370 Gm17330-201ENSMUST00000221047 165 ntBASIC13.04□□□□□ -0.32
Fv4P11370 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.04□□□□□ -0.32
Fv4P11370 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Fv4P11370 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.04□□□□□ -0.32
Fv4P11370 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.04□□□□□ -0.32
Fv4P11370 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Fv4P11370 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Fv4P11370 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fv4P11370 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Fv4P11370 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.03□□□□□ -0.32
Fv4P11370 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Fv4P11370 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Fv4P11370 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.03□□□□□ -0.32
Fv4P11370 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.03□□□□□ -0.32
Fv4P11370 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Fv4P11370 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.03□□□□□ -0.32
Fv4P11370 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.03□□□□□ -0.32
Fv4P11370 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.03□□□□□ -0.32
Fv4P11370 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.03□□□□□ -0.32
Fv4P11370 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fv4P11370 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.03□□□□□ -0.32
Fv4P11370 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms