Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.89□□□□□ -0.03
Hoxc6P10629 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Mir7070-201ENSMUST00000183657 86 ntBASIC14.89□□□□□ -0.03
Hoxc6P10629 Gm6082-201ENSMUST00000215204 454 ntBASIC14.89□□□□□ -0.03
Hoxc6P10629 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hoxc6P10629 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxc6P10629 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hoxc6P10629 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.89□□□□□ -0.03
Hoxc6P10629 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxc6P10629 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.88□□□□□ -0.03
Hoxc6P10629 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.88□□□□□ -0.03
Hoxc6P10629 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm11222-201ENSMUST00000119005 738 ntBASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm11964-201ENSMUST00000120982 444 ntBASIC14.88□□□□□ -0.03
Hoxc6P10629 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Mir5132-201ENSMUST00000175166 71 ntBASIC14.88□□□□□ -0.03
Hoxc6P10629 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.88□□□□□ -0.03
Hoxc6P10629 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm5781-201ENSMUST00000219792 443 ntBASIC14.88□□□□□ -0.03
Hoxc6P10629 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxc6P10629 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hoxc6P10629 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Gm12363-201ENSMUST00000122250 668 ntBASIC14.87□□□□□ -0.03
Hoxc6P10629 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.87□□□□□ -0.03
Hoxc6P10629 Morn2-202ENSMUST00000227729 656 ntBASIC14.87□□□□□ -0.03
Hoxc6P10629 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.87□□□□□ -0.03
Hoxc6P10629 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc6P10629 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms