Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gm15957-201ENSMUST00000118893 974 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gm11780-201ENSMUST00000136880 516 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 AC139350.3-201ENSMUST00000226151 420 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.23□□□□□ -0.93
Smim1P0C8K7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smim1P0C8K7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gm16026-204ENSMUST00000162652 683 ntBASIC9.22□□□□□ -0.93
Smim1P0C8K7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gm9484-201ENSMUST00000195892 1159 ntBASIC9.22□□□□□ -0.93
Smim1P0C8K7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gm18032-201ENSMUST00000222541 538 ntBASIC9.22□□□□□ -0.93
Smim1P0C8K7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms