Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.24■□□□□ 0.19
Col4a1P02463 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.24■□□□□ 0.19
Col4a1P02463 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.24■□□□□ 0.19
Col4a1P02463 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.24■□□□□ 0.19
Col4a1P02463 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.24■□□□□ 0.19
Col4a1P02463 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.24■□□□□ 0.19
Col4a1P02463 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.23■□□□□ 0.19
Col4a1P02463 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.23■□□□□ 0.19
Col4a1P02463 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.23■□□□□ 0.19
Col4a1P02463 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 Mir7221-201ENSMUST00000184009 72 ntBASIC16.23■□□□□ 0.19
Col4a1P02463 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.23■□□□□ 0.19
Col4a1P02463 Gm44967-201ENSMUST00000207047 631 ntBASIC16.23■□□□□ 0.19
Col4a1P02463 Gm5363-201ENSMUST00000211927 938 ntBASIC16.23■□□□□ 0.19
Col4a1P02463 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col4a1P02463 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a1P02463 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.22■□□□□ 0.19
Col4a1P02463 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.22■□□□□ 0.19
Col4a1P02463 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Gm10434-201ENSMUST00000101158 471 ntBASIC16.22■□□□□ 0.19
Col4a1P02463 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Col4a1P02463 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.22■□□□□ 0.19
Col4a1P02463 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.22■□□□□ 0.19
Col4a1P02463 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.22■□□□□ 0.19
Col4a1P02463 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.22■□□□□ 0.19
Col4a1P02463 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.22■□□□□ 0.19
Col4a1P02463 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.22■□□□□ 0.19
Col4a1P02463 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.22■□□□□ 0.19
Col4a1P02463 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col4a1P02463 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a1P02463 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Gm13736-201ENSMUST00000119272 253 ntBASIC16.21■□□□□ 0.19
Col4a1P02463 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.21■□□□□ 0.19
Col4a1P02463 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col4a1P02463 Mir5132-201ENSMUST00000175166 71 ntBASIC16.21■□□□□ 0.19
Col4a1P02463 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.21■□□□□ 0.19
Col4a1P02463 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.21■□□□□ 0.19
Col4a1P02463 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.21■□□□□ 0.19
Col4a1P02463 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.21■□□□□ 0.19
Col4a1P02463 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a1P02463 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms