Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Mir7654-201ENSMUST00000185082 70 ntBASIC12.35□□□□□ -0.43
P01852 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.35□□□□□ -0.43
P01852 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Gm18307-201ENSMUST00000206864 949 ntBASIC12.35□□□□□ -0.43
P01852 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.35□□□□□ -0.43
P01852 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.35□□□□□ -0.43
P01852 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.35□□□□□ -0.43
P01852 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.35□□□□□ -0.43
P01852 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.35□□□□□ -0.43
P01852 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
P01852 Gm6180-201ENSMUST00000065243 498 ntBASIC12.35□□□□□ -0.43
P01852 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.35□□□□□ -0.43
P01852 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.35□□□□□ -0.43
P01852 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
P01852 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
P01852 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
P01852 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P01852 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P01852 Gm15770-201ENSMUST00000117498 584 ntBASIC12.34□□□□□ -0.43
P01852 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Gm9794-201ENSMUST00000202370 423 ntBASIC12.34□□□□□ -0.43
P01852 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.34□□□□□ -0.43
P01852 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P01852 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P01852 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P01852 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
P01852 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P01852 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
P01852 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.34□□□□□ -0.43
P01852 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
P01852 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.34□□□□□ -0.43
P01852 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.34□□□□□ -0.43
P01852 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01852 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.43
P01852 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
P01852 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
P01852 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.33□□□□□ -0.44
P01852 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
P01852 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.33□□□□□ -0.44
P01852 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.33□□□□□ -0.44
P01852 Gm6745-201ENSMUST00000199216 526 ntBASIC12.33□□□□□ -0.44
P01852 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
P01852 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.33□□□□□ -0.44
P01852 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.33□□□□□ -0.44
P01852 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.33□□□□□ -0.44
P01852 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms