Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
Cops4O88544 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.45□□□□□ -0.42
Cops4O88544 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Cops4O88544 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Cops4O88544 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cops4O88544 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.44□□□□□ -0.42
Cops4O88544 Gm27525-201ENSMUST00000184465 107 ntBASIC12.44□□□□□ -0.42
Cops4O88544 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.44□□□□□ -0.42
Cops4O88544 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cops4O88544 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cops4O88544 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.44□□□□□ -0.42
Cops4O88544 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cops4O88544 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cops4O88544 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cops4O88544 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cops4O88544 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cops4O88544 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.43□□□□□ -0.42
Cops4O88544 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Cops4O88544 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.43□□□□□ -0.42
Cops4O88544 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cops4O88544 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.43□□□□□ -0.42
Cops4O88544 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cops4O88544 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cops4O88544 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.43□□□□□ -0.42
Cops4O88544 Gm27494-201ENSMUST00000184735 189 ntBASIC12.43□□□□□ -0.42
Cops4O88544 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.43□□□□□ -0.42
Cops4O88544 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.43□□□□□ -0.42
Cops4O88544 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cops4O88544 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cops4O88544 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cops4O88544 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops4O88544 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.42□□□□□ -0.42
Cops4O88544 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.42□□□□□ -0.42
Cops4O88544 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cops4O88544 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cops4O88544 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cops4O88544 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cops4O88544 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cops4O88544 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cops4O88544 Mir1895-201ENSMUST00000122615 79 ntBASIC12.42□□□□□ -0.42
Cops4O88544 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms