Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.3■□□□□ 0.36
Nid2O88322 Gm44262-201ENSMUST00000204969 372 ntBASIC17.3■□□□□ 0.36
Nid2O88322 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC17.3■□□□□ 0.36
Nid2O88322 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.3■□□□□ 0.36
Nid2O88322 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.3■□□□□ 0.36
Nid2O88322 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nid2O88322 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.3■□□□□ 0.36
Nid2O88322 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nid2O88322 Gm5523-201ENSMUST00000180415 997 ntBASIC17.3■□□□□ 0.36
Nid2O88322 Gm8959-201ENSMUST00000213150 571 ntBASIC17.3■□□□□ 0.36
Nid2O88322 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.29■□□□□ 0.36
Nid2O88322 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.29■□□□□ 0.36
Nid2O88322 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nid2O88322 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nid2O88322 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC17.29■□□□□ 0.36
Nid2O88322 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC17.29■□□□□ 0.36
Nid2O88322 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Gm28450-201ENSMUST00000187349 638 ntBASIC17.29■□□□□ 0.36
Nid2O88322 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.29■□□□□ 0.36
Nid2O88322 Gm42997-202ENSMUST00000200321 985 ntBASIC17.29■□□□□ 0.36
Nid2O88322 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC17.29■□□□□ 0.36
Nid2O88322 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nid2O88322 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.28■□□□□ 0.36
Nid2O88322 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nid2O88322 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nid2O88322 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nid2O88322 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Nid2O88322 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.28■□□□□ 0.36
Nid2O88322 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Nid2O88322 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.28■□□□□ 0.36
Nid2O88322 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC17.28■□□□□ 0.36
Nid2O88322 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC17.28■□□□□ 0.36
Nid2O88322 Gm25043-201ENSMUST00000158604 212 ntBASIC17.28■□□□□ 0.36
Nid2O88322 Gm25700-201ENSMUST00000177693 110 ntBASIC17.28■□□□□ 0.36
Nid2O88322 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC17.28■□□□□ 0.36
Nid2O88322 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC17.28■□□□□ 0.36
Nid2O88322 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.28■□□□□ 0.36
Nid2O88322 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Gm10702-201ENSMUST00000098929 1268 ntBASIC17.28■□□□□ 0.36
Nid2O88322 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nid2O88322 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nid2O88322 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nid2O88322 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nid2O88322 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nid2O88322 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.27■□□□□ 0.36
Nid2O88322 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nid2O88322 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nid2O88322 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nid2O88322 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
Nid2O88322 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC17.27■□□□□ 0.35
Nid2O88322 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nid2O88322 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC17.27■□□□□ 0.35
Nid2O88322 Gm3096-201ENSMUST00000185770 364 ntBASIC17.27■□□□□ 0.35
Nid2O88322 Gm44405-201ENSMUST00000198952 126 ntBASIC17.27■□□□□ 0.35
Nid2O88322 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.27■□□□□ 0.35
Nid2O88322 Gm5904-201ENSMUST00000210286 865 ntBASIC17.27■□□□□ 0.35
Nid2O88322 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nid2O88322 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nid2O88322 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms