Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm44094-201ENSMUST00000204703 2030 ntBASIC17.15■□□□□ 0.34
Ubr1O70481 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Ubr1O70481 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.15■□□□□ 0.34
Ubr1O70481 Gm45224-201ENSMUST00000208203 414 ntBASIC17.15■□□□□ 0.34
Ubr1O70481 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ubr1O70481 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ubr1O70481 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubr1O70481 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubr1O70481 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Ubr1O70481 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.15■□□□□ 0.34
Ubr1O70481 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm24990-201ENSMUST00000157406 323 ntBASIC17.15■□□□□ 0.34
Ubr1O70481 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm27046-201ENSMUST00000182160 463 ntBASIC17.15■□□□□ 0.34
Ubr1O70481 Gm27341-201ENSMUST00000183570 106 ntBASIC17.15■□□□□ 0.34
Ubr1O70481 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC17.15■□□□□ 0.34
Ubr1O70481 Gm37201-201ENSMUST00000191845 523 ntBASIC17.15■□□□□ 0.34
Ubr1O70481 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr1O70481 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ubr1O70481 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubr1O70481 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubr1O70481 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ubr1O70481 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubr1O70481 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ubr1O70481 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.14■□□□□ 0.33
Ubr1O70481 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.14■□□□□ 0.33
Ubr1O70481 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubr1O70481 Gm3786-201ENSMUST00000202659 378 ntBASIC17.14■□□□□ 0.33
Ubr1O70481 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.14■□□□□ 0.33
Ubr1O70481 Mir339-201ENSMUST00000083659 96 ntBASIC17.14■□□□□ 0.33
Ubr1O70481 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubr1O70481 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubr1O70481 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr1O70481 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ubr1O70481 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Gm7857-201ENSMUST00000117957 358 ntBASIC17.13■□□□□ 0.33
Ubr1O70481 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.13■□□□□ 0.33
Ubr1O70481 Gm15276-201ENSMUST00000145953 498 ntBASIC17.13■□□□□ 0.33
Ubr1O70481 Gm16296-201ENSMUST00000159905 325 ntBASIC17.13■□□□□ 0.33
Ubr1O70481 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC17.13■□□□□ 0.33
Ubr1O70481 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 AC165260.3-202ENSMUST00000224550 1031 ntBASIC17.13■□□□□ 0.33
Ubr1O70481 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ubr1O70481 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.13■□□□□ 0.33
Ubr1O70481 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.13■□□□□ 0.33
Ubr1O70481 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms