Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.37□□□□□ -0.59
Cxcl13O55038 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Gm13392-201ENSMUST00000117708 150 ntBASIC11.37□□□□□ -0.59
Cxcl13O55038 Gm11618-201ENSMUST00000117946 267 ntBASIC11.37□□□□□ -0.59
Cxcl13O55038 Gm13369-201ENSMUST00000119442 987 ntBASIC11.37□□□□□ -0.59
Cxcl13O55038 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.37□□□□□ -0.59
Cxcl13O55038 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.37□□□□□ -0.59
Cxcl13O55038 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.37□□□□□ -0.59
Cxcl13O55038 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cxcl13O55038 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cxcl13O55038 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cxcl13O55038 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.36□□□□□ -0.59
Cxcl13O55038 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cxcl13O55038 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.36□□□□□ -0.59
Cxcl13O55038 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Gm5370-201ENSMUST00000187187 574 ntBASIC11.36□□□□□ -0.59
Cxcl13O55038 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl13O55038 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.36□□□□□ -0.59
Cxcl13O55038 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Gm10478-201ENSMUST00000084451 396 ntBASIC11.36□□□□□ -0.59
Cxcl13O55038 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cxcl13O55038 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.36□□□□□ -0.59
Cxcl13O55038 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.36□□□□□ -0.59
Cxcl13O55038 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cxcl13O55038 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.36□□□□□ -0.59
Cxcl13O55038 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl13O55038 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl13O55038 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl13O55038 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl13O55038 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.35□□□□□ -0.59
Cxcl13O55038 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.35□□□□□ -0.59
Cxcl13O55038 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Cxcl13O55038 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl13O55038 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl13O55038 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cxcl13O55038 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms