Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.54□□□□□ -0.4
BckdkO55028 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
BckdkO55028 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
BckdkO55028 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BckdkO55028 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.53□□□□□ -0.4
BckdkO55028 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.53□□□□□ -0.4
BckdkO55028 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.53□□□□□ -0.4
BckdkO55028 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.53□□□□□ -0.4
BckdkO55028 Gm18187-201ENSMUST00000196476 984 ntBASIC12.53□□□□□ -0.4
BckdkO55028 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.53□□□□□ -0.4
BckdkO55028 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.53□□□□□ -0.4
BckdkO55028 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.53□□□□□ -0.4
BckdkO55028 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
BckdkO55028 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.53□□□□□ -0.4
BckdkO55028 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BckdkO55028 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
BckdkO55028 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
BckdkO55028 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.52□□□□□ -0.4
BckdkO55028 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BckdkO55028 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
BckdkO55028 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
BckdkO55028 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
BckdkO55028 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.52□□□□□ -0.41
BckdkO55028 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.52□□□□□ -0.41
BckdkO55028 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.52□□□□□ -0.41
BckdkO55028 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
BckdkO55028 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
BckdkO55028 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.52□□□□□ -0.41
BckdkO55028 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BckdkO55028 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.52□□□□□ -0.41
BckdkO55028 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
BckdkO55028 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
BckdkO55028 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Gm11918-201ENSMUST00000121660 179 ntBASIC12.51□□□□□ -0.41
BckdkO55028 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.51□□□□□ -0.41
BckdkO55028 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
BckdkO55028 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.51□□□□□ -0.41
BckdkO55028 Gm43433-201ENSMUST00000196573 481 ntBASIC12.51□□□□□ -0.41
BckdkO55028 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.51□□□□□ -0.41
BckdkO55028 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms