Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Nr1i3O35627 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.52□□□□□ -0.09
Nr1i3O35627 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm12403-201ENSMUST00000121384 959 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm5161-201ENSMUST00000075243 853 ntBASIC14.51□□□□□ -0.09
Nr1i3O35627 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nr1i3O35627 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1i3O35627 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.5□□□□□ -0.09
Nr1i3O35627 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.5□□□□□ -0.09
Nr1i3O35627 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.5□□□□□ -0.09
Nr1i3O35627 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nr1i3O35627 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.5□□□□□ -0.09
Nr1i3O35627 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nr1i3O35627 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.5□□□□□ -0.09
Nr1i3O35627 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1i3O35627 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.5□□□□□ -0.09
Nr1i3O35627 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nr1i3O35627 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nr1i3O35627 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.49□□□□□ -0.09
Nr1i3O35627 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.49□□□□□ -0.09
Nr1i3O35627 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.49□□□□□ -0.09
Nr1i3O35627 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Nr1i3O35627 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.49□□□□□ -0.09
Nr1i3O35627 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nr1i3O35627 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms