Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.08■□□□□ 0.33
Col15a1O35206 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.08■□□□□ 0.33
Col15a1O35206 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col15a1O35206 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col15a1O35206 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col15a1O35206 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col15a1O35206 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col15a1O35206 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col15a1O35206 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col15a1O35206 Gm23270-201ENSMUST00000104055 131 ntBASIC17.08■□□□□ 0.32
Col15a1O35206 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.08■□□□□ 0.32
Col15a1O35206 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.08■□□□□ 0.32
Col15a1O35206 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col15a1O35206 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Col15a1O35206 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.07■□□□□ 0.32
Col15a1O35206 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Col15a1O35206 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col15a1O35206 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col15a1O35206 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.07■□□□□ 0.32
Col15a1O35206 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.07■□□□□ 0.32
Col15a1O35206 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col15a1O35206 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Col15a1O35206 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Col15a1O35206 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.06■□□□□ 0.32
Col15a1O35206 Gm31256-201ENSMUST00000194705 506 ntBASIC17.06■□□□□ 0.32
Col15a1O35206 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.06■□□□□ 0.32
Col15a1O35206 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.06■□□□□ 0.32
Col15a1O35206 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.06■□□□□ 0.32
Col15a1O35206 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col15a1O35206 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.06■□□□□ 0.32
Col15a1O35206 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Gm44775-201ENSMUST00000207266 1456 ntBASIC17.06■□□□□ 0.32
Col15a1O35206 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col15a1O35206 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col15a1O35206 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col15a1O35206 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.05■□□□□ 0.32
Col15a1O35206 Gm38317-201ENSMUST00000195564 343 ntBASIC17.05■□□□□ 0.32
Col15a1O35206 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.05■□□□□ 0.32
Col15a1O35206 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.05■□□□□ 0.32
Col15a1O35206 Gm9004-201ENSMUST00000218739 1222 ntBASIC17.05■□□□□ 0.32
Col15a1O35206 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.05■□□□□ 0.32
Col15a1O35206 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col15a1O35206 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col15a1O35206 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col15a1O35206 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms