Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ube3aO08759 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ube3aO08759 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Ube3aO08759 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ube3aO08759 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Ube3aO08759 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.58□□□□□ -0.08
Ube3aO08759 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.58□□□□□ -0.08
Ube3aO08759 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm5566-201ENSMUST00000116118 459 ntBASIC14.58□□□□□ -0.08
Ube3aO08759 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.58□□□□□ -0.08
Ube3aO08759 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm44335-201ENSMUST00000196879 141 ntBASIC14.58□□□□□ -0.08
Ube3aO08759 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm44297-201ENSMUST00000198304 141 ntBASIC14.58□□□□□ -0.08
Ube3aO08759 Gm44346-201ENSMUST00000198851 141 ntBASIC14.58□□□□□ -0.08
Ube3aO08759 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm6916-202ENSMUST00000205523 195 ntBASIC14.58□□□□□ -0.08
Ube3aO08759 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.58□□□□□ -0.08
Ube3aO08759 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ube3aO08759 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.58□□□□□ -0.08
Ube3aO08759 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.58□□□□□ -0.08
Ube3aO08759 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Ube3aO08759 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ube3aO08759 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.57□□□□□ -0.08
Ube3aO08759 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.57□□□□□ -0.08
Ube3aO08759 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ube3aO08759 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ube3aO08759 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.57□□□□□ -0.08
Ube3aO08759 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.57□□□□□ -0.08
Ube3aO08759 Dupd1-202ENSMUST00000224735 548 ntBASIC14.57□□□□□ -0.08
Ube3aO08759 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.57□□□□□ -0.08
Ube3aO08759 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.57□□□□□ -0.08
Ube3aO08759 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.57□□□□□ -0.08
Ube3aO08759 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ube3aO08759 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.57□□□□□ -0.08
Ube3aO08759 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Ube3aO08759 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ube3aO08759 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ube3aO08759 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.56□□□□□ -0.08
Ube3aO08759 Gm5312-201ENSMUST00000203728 547 ntBASIC14.56□□□□□ -0.08
Ube3aO08759 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.56□□□□□ -0.08
Ube3aO08759 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ube3aO08759 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.56□□□□□ -0.08
Ube3aO08759 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ube3aO08759 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ube3aO08759 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.56□□□□□ -0.08
Ube3aO08759 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ube3aO08759 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms