Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3727J3QM54 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.43□□□□□ -0.58
Gm3727J3QM54 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3727J3QM54 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.43□□□□□ -0.58
Gm3727J3QM54 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3727J3QM54 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3727J3QM54 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3727J3QM54 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Gm3727J3QM54 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3727J3QM54 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.42□□□□□ -0.58
Gm3727J3QM54 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.42□□□□□ -0.58
Gm3727J3QM54 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3727J3QM54 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm13597-201ENSMUST00000121239 375 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm27301-201ENSMUST00000184012 127 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm33142-201ENSMUST00000193913 867 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm6376-201ENSMUST00000209407 580 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm18027-201ENSMUST00000218947 619 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 AV026068-213ENSMUST00000223675 1171 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms