Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gm14057-201ENSMUST00000120631 482 ntBASIC13.86□□□□□ -0.19
Atf6F6VAN0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.86□□□□□ -0.19
Atf6F6VAN0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.86□□□□□ -0.19
Atf6F6VAN0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.86□□□□□ -0.19
Atf6F6VAN0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
Atf6F6VAN0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Gm28760-201ENSMUST00000185995 736 ntBASIC13.85□□□□□ -0.19
Atf6F6VAN0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.85□□□□□ -0.19
Atf6F6VAN0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Atf6F6VAN0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.84□□□□□ -0.19
Atf6F6VAN0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.84□□□□□ -0.19
Atf6F6VAN0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.84□□□□□ -0.19
Atf6F6VAN0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atf6F6VAN0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Atf6F6VAN0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Atf6F6VAN0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Atf6F6VAN0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Atf6F6VAN0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Atf6F6VAN0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms