Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Gm24749-201ENSMUST00000157838 343 ntBASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Gm25043-201ENSMUST00000158604 212 ntBASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scaf11E9PZM7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Gm13408-201ENSMUST00000119822 798 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Gm13935-201ENSMUST00000121859 798 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Gm18734-201ENSMUST00000172937 808 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Gm22121-201ENSMUST00000175148 54 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 AC154276.3-201ENSMUST00000227643 998 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Gm37737-201ENSMUST00000195013 1638 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Gm14371-201ENSMUST00000138925 1518 ntBASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scaf11E9PZM7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Gm12286-201ENSMUST00000119246 1002 ntBASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 AC122876.1-201ENSMUST00000217619 825 ntBASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scaf11E9PZM7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 AC125486.1-201ENSMUST00000218701 320 ntBASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scaf11E9PZM7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scaf11E9PZM7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scaf11E9PZM7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scaf11E9PZM7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scaf11E9PZM7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms