Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.28□□□□□ -0.28
Srp54bE9PXC0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Srp54bE9PXC0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Srp54bE9PXC0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm12203-201ENSMUST00000118235 598 ntBASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm12209-201ENSMUST00000120089 596 ntBASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Mir6420-201ENSMUST00000185032 102 ntBASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm5370-201ENSMUST00000187187 574 ntBASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Srp54bE9PXC0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.26□□□□□ -0.29
Srp54bE9PXC0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms