Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Gm25925-201ENSMUST00000158314 306 ntBASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Gm27680-201ENSMUST00000184192 160 ntBASIC13.54□□□□□ -0.24
Gm28043E0CXC2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Gm44872-201ENSMUST00000207864 420 ntBASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.54□□□□□ -0.24
Gm28043E0CXC2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm28043E0CXC2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Gm14767-201ENSMUST00000121559 586 ntBASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Mir1897-201ENSMUST00000122581 272 ntBASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Mir6956-201ENSMUST00000183598 62 ntBASIC13.53□□□□□ -0.24
Gm28043E0CXC2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gm28043E0CXC2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm28043E0CXC2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm28043E0CXC2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.52□□□□□ -0.24
Gm28043E0CXC2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm28043E0CXC2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm28043E0CXC2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms