Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hfm1D3Z4R1 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Gm9826-201ENSMUST00000029124 1299 ntBASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hfm1D3Z4R1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12616-201ENSMUST00000118594 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12624-201ENSMUST00000177615 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12621-201ENSMUST00000177760 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12615-201ENSMUST00000177970 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12622-201ENSMUST00000177975 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12627-201ENSMUST00000178412 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12625-201ENSMUST00000179122 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12614-201ENSMUST00000179586 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm12613-201ENSMUST00000180323 382 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm43416-201ENSMUST00000201916 1015 ntBASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hfm1D3Z4R1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hfm1D3Z4R1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hfm1D3Z4R1 Gm4864-201ENSMUST00000219894 1461 ntBASIC18.58■□□□□ 0.56
Hfm1D3Z4R1 Tmed9-203ENSMUST00000224741 1450 ntBASIC18.58■□□□□ 0.56
Hfm1D3Z4R1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hfm1D3Z4R1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hfm1D3Z4R1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Gm45691-201ENSMUST00000206905 1120 ntBASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.57■□□□□ 0.56
Hfm1D3Z4R1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hfm1D3Z4R1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms