Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Rd3lB2RV38 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rd3lB2RV38 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Gm43474-201ENSMUST00000196415 774 ntBASIC11.77□□□□□ -0.53
Rd3lB2RV38 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Gm18049-201ENSMUST00000208909 581 ntBASIC11.77□□□□□ -0.53
Rd3lB2RV38 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.77□□□□□ -0.53
Rd3lB2RV38 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rd3lB2RV38 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.76□□□□□ -0.53
Rd3lB2RV38 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.76□□□□□ -0.53
Rd3lB2RV38 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Gm9824-201ENSMUST00000178707 561 ntBASIC11.76□□□□□ -0.53
Rd3lB2RV38 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rd3lB2RV38 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.76□□□□□ -0.53
Rd3lB2RV38 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rd3lB2RV38 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms