Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav12d-1A0N8R0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav12d-1A0N8R0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav12d-1A0N8R0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gm15770-201ENSMUST00000117498 584 ntBASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gm11779-201ENSMUST00000118541 368 ntBASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Mir6990-201ENSMUST00000183724 91 ntBASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gm43125-201ENSMUST00000201724 730 ntBASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav12d-1A0N8R0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav12d-1A0N8R0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Trav12d-1A0N8R0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav12d-1A0N8R0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms