Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Gm15371-201ENSMUST00000117057 784 ntBASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Gm26464-201ENSMUST00000157094 305 ntBASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Gm2445-201ENSMUST00000182798 989 ntBASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cfap99A0A140LIX9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cfap99A0A140LIX9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm15376-201ENSMUST00000122258 783 ntBASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm6983-201ENSMUST00000214912 628 ntBASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cfap99A0A140LIX9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfap99A0A140LIX9 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms