Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm13884-201ENSMUST00000118103 829 ntBASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm27301-201ENSMUST00000184012 127 ntBASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm18737-201ENSMUST00000173594 937 ntBASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav3n-3A0A0G2JEM0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms