Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Skp2Q9Z0Z3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm15460-201ENSMUST00000118147 391 ntBASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Shd-206ENSMUST00000225145 998 ntBASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Skp2Q9Z0Z3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Mir449b-201ENSMUST00000104833 80 ntBASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Gm8410-201ENSMUST00000117225 605 ntBASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Gm15693-201ENSMUST00000120470 637 ntBASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Gm25925-201ENSMUST00000158314 306 ntBASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Skp2Q9Z0Z3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms