Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx6Q9R1R0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx6Q9R1R0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.09□□□□□ -0.31
Lhx6Q9R1R0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Lhx6Q9R1R0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx6Q9R1R0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx6Q9R1R0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx6Q9R1R0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx6Q9R1R0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx6Q9R1R0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Lhx6Q9R1R0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gm11485-201ENSMUST00000120048 1175 ntBASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gm5354-201ENSMUST00000182417 973 ntBASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gm43531-201ENSMUST00000200676 1114 ntBASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Gm16476-201ENSMUST00000221544 139 ntBASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 AC131100.2-201ENSMUST00000227701 998 ntBASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx6Q9R1R0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Phf7-206ENSMUST00000228437 1373 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm15808-201ENSMUST00000119046 604 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Mup-ps10-201ENSMUST00000119626 556 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm23884-201ENSMUST00000122687 294 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm5479-201ENSMUST00000160578 435 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm7584-201ENSMUST00000175829 940 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Mir7070-201ENSMUST00000183657 86 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm5370-201ENSMUST00000187187 574 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 AU022133-201ENSMUST00000200601 873 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 AC192616.3-201ENSMUST00000220797 1124 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm9229-201ENSMUST00000222777 126 ntBASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lhx6Q9R1R0 Gm38195-201ENSMUST00000194247 1499 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms