Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.19□□□□□ -0.3
Cdh17Q9R100 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.19□□□□□ -0.3
Cdh17Q9R100 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.18□□□□□ -0.3
Cdh17Q9R100 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.18□□□□□ -0.3
Cdh17Q9R100 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.18□□□□□ -0.3
Cdh17Q9R100 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.18□□□□□ -0.3
Cdh17Q9R100 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.18□□□□□ -0.3
Cdh17Q9R100 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdh17Q9R100 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Gm9063-201ENSMUST00000223299 582 ntBASIC13.17□□□□□ -0.3
Cdh17Q9R100 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cdh17Q9R100 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh17Q9R100 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms