Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Gm22189-201ENSMUST00000103822 86 ntBASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Gm42612-201ENSMUST00000197986 623 ntBASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Gm43170-201ENSMUST00000199827 612 ntBASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.43□□□□□ -0.26
Tubb3Q9ERD7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gm9797-201ENSMUST00000052902 613 ntBASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb3Q9ERD7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms